1.Zhang KK, Fan W, Huang ZW, Chen DF, Yao ZW, Li YF, Yang YF*, Qiu DY*. Transcriptome analysis identifies novel responses and potential regulatory genes involved in 12-deoxyphorbol-13-phenylacetate biosynthesis of Euphorbia resinifera. Ind Crop Prod, 2019, 135, 138-145.
2.Yang YF, Hou S, Fan W, Lu LL, Hui N, Wu X, Wei JH*. Expression patterns of some genes involved in tanshinone biosynthesis in Salvia miltiorrhiza roots. Ind Crop Prod, 2019, 130, 606-614.
3.Yang YF, Zhang KK, Yang LY, Lv X, Wu Y, Liu HW, Lu Q, Chen DF*, Qiu DY*. Identification and characterization of MYC transcription factors in Taxus sp. Gene, 2018, 675: 1-8.
4.Yang YF#, Zhu K#, Wu J, Liu LQ, Sun GL, He YB, Chen FD, Yu DY*. Identification and characterization of a novel NAC-like gene in chrysanthemum (Dendranthema lavandulifolium). Plant Cell Rep, 2016, 35(8):1783-1798.
5.Yang YF#, Zhao HN#, Barrero RA#, Zhang BH#, Sun GL#, Wilson IW, Xie FL, Walker KD, Parks JW, Bruce R, Guo GW, Chen L, Zhang Y, Huang X, Tang Q, Liu HW, Bellgard MI, Hoffman A, Lai JS, Qiu DY*. Genome sequencing and analysis of the paclitaxel-producing endophytic fungus Penicillium aurantiogriseum NRRL 62431. BMC Genomics, 2014, 15: 69.
6.Sun GL#, Yang YF#, Xie FL, Wen JF, Wu JQ, Wilson IW, Tang Q, Liu HW, Qiu DY*. Deep sequencing reveals transcriptome re-programming of Taxus × media cells to the elicitation with methyl jasmonate. PLoS One. 2013, 8(4):e62865.
7.Yang YF, Hou S, Cui, GH, Chen SL, Wei JH*, Huang LQ*. Characterization of reference genes for quantitative real-time PCR analysis in various tissues of Salvia miltiorrhiza. Molecular Biology Reports, 2010, 37(1): 507-513.
8.Yang YF, Wu J, Zhu K, Liu LQ, Chen FD, Yu DY*. Identification and characterization of two chrysanthemum (Dendronthema × moriforlium) DREB genes, belonging to the AP2/EREBP family. Molecular Biology Reports, 2009, 36(1): 71-81.
9.Yang YF, Tang Q, Liu HW, Qiu DY*. Tree Omics and Biotechnology in China. Plant Omics, 2011, 4(6): 288-294 (SCI).
10.蒋路园，王旭，张恺恺，陈段芬，邱德有，杨艳芳*. 红豆杉TcERF基因qRt-PCR体系构建与优化. 农业生物技术学报，2020, 28(06): 1096-1104.
11.丰美静，张恺恺，黄中文，邱德有，陈段芬，杨艳芳*. 东北红豆杉温室扦插繁殖实验. 北方园艺，2020, 13：65-70.
12.张恺恺，吕星，杨立莹，陈段芬，邱德有，杨艳芳*. 红豆杉TbPA2基因荧光定量PCR体系的建立及优化.林业科学研究, 2019, 32(1): 39-46.
13.张恺恺，李清，惠楠，陈段芬，邱德有，杨艳芳*. 红豆杉总RNA提取方法的比较. 分子植物育种，2019, 17(18): 5993-5999 (CSCD核心期刊).
14.杨艳芳，刘洪伟，邱德有*. 基于高通量测序的瑞香狼毒转录组数据分析. 中草药, 2017, 48(22): 4740-4747.
15.朱凯，武剑，杨艳芳*，陈发棣，喻德跃. 甘菊DlNAC1转录因子提高烟草耐高温能力. 植物研究，2017, 37(3): 432-439.
16.杨艳芳，武剑，朱凯，刘黎卿，陈发棣，喻德跃*. 过量表达菊花DmDREBa基因提高转化烟草耐低温能力. 植物研究, 2016, 36(5): 721-729.
17.武剑，杨艳芳*，王慧，朱凯，刘黎卿，陈发棣，喻德跃. 菊花DmDREBa/b基因提高转基因烟草耐逆性研究. 分子植物育种, 2016, 14(11): 3063-3072.
18.周华，朱琪，杨艳芳*，刘洪伟，余发新，邱德有. 南方红豆杉bHLH基因克隆与序列分析. 植物研究，2015, 1: 52-59.
19.杨艳芳，刘洪伟，邱德有*. 欧洲红豆杉AP2/ERF转录因子基因序列分析.氨基酸和生物资源, 2014, 36(4): 54-59.
20.周华，朱琪，杨艳芳*，余发新，邱德有. 红豆杉分子生物学研究进展. 植物生理学报，2014, 4: 373-381.
21.杨艳芳，付尧，魏建和，刘忠玲. 不同含水量对柴胡种子活力的影响. 种子， 2009, 28(4): 41-45.